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Dystrophin isoforms
Structural domains
Binding domains
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Wild-type dystrophin
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Wild-type dystrophin
Isoform full length sequences (cDNA and protein)
Select sequences you want to see and click on "see cDNA sequences in fasta format" to obtain cDNA sequences or "see protein sequences in fasta format" to obtain protein sequences.
All known variants/isoforms
Name
cDNA reference
Protein reference
Dp427m
NM_004006.2
NP_003997.1
Dp427p1
NM_004009.3
NP_004000.1
Dp427c
NM_000109.3
NP_000100.2
Dp260-1
NM_004011.3
NP_004002.2
Dp260-2
NM_004012.3
NP_004003.1
Dp140b
NM_004021.2
NP_004012.1
Dp140ab
NM_004022.2
NP_004013.1
Dp140
NM_004013.2
NP_004004.1
Dp140bc
NM_004023.2
NP_004014.1
Dp140c
NM_004020.2
NP_004011.1
Dp116
NM_004014.2
NP_004005.1
Dp71b
NM_004016.2
NP_004007.1
Dp71ab
NM_004018.2
NP_004009.1
Dp71
NM_004015.2
NP_004006.1
Dp71a
NM_004017.2
NP_004008.1
Dp40
NM_004019.2
NP_004010.1
Exon sequences
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1) Click on exon(s) in scheme to visualize sequence(s) in right box
2) Select sequence(s) in this area and copy it in a text file to retrieve it(them)
Or select all exons
Structural domain sequences
Click on structural domain(s) to see a table with all versions of the selected domain
Click here to see all short sequences between structural domains.
You can select a sequence to visualize it in the area below
CH1
Source
Positions
Size
Add Sequence below?
Norwood
*
9 to 121
113
Banuelos
14 to 124
111
cd00014
16 to 119
104
smart00033
17 to 117
101
pfam00307
17 to 119
103
CH2
Source
Positions
Size
Add Sequence below?
Norwood
*
131 to 246
116
Banuelos
133 to 243
111
cd00014
135 to 240
106
smart00033
136 to 235
100
pfam00307
136 to 240
105
H1
Source
Positions
Size
Add Sequence below?
Koenig
*
247 to 337
91
R1
Source
Positions
Size
Add Sequence below?
Winder
*
338 to 446
109
Koenig
337 to 447
111
R2
Source
Positions
Size
Add Sequence below?
Winder
*
447 to 557
111
Koenig
448 to 556
109
R3
Source
Positions
Size
Add Sequence below?
Winder
*
558 to 668
111
Koenig
557 to 667
111
H2
Source
Positions
Size
Add Sequence below?
Koenig
668 to 717
50
Winder
*
669 to 717
49
R4
Source
Positions
Size
Add Sequence below?
Winder
*
718 to 828
111
Koenig
718 to 828
111
R5
Source
Positions
Size
Add Sequence below?
Winder
*
829 to 937
109
Koenig
829 to 934
106
R6
Source
Positions
Size
Add Sequence below?
Winder
*
938 to 1046
109
Koenig
935 to 1045
111
R7
Source
Positions
Size
Add Sequence below?
Winder
*
1047 to 1155
109
Koenig
1046 to 1154
109
R8
Source
Positions
Size
Add Sequence below?
Winder
*
1156 to 1264
109
Koenig
1155 to 1263
109
R9
Source
Positions
Size
Add Sequence below?
Winder
*
1265 to 1368
104
Koenig
1264 to 1367
104
R10
Source
Positions
Size
Add Sequence below?
Winder
*
1369 to 1460
92
Koenig
1368 to 1463
96
R11
Source
Positions
Size
Add Sequence below?
Winder
*
1461 to 1569
109
Koenig
1464 to 1568
105
R12
Source
Positions
Size
Add Sequence below?
Winder
*
1570 to 1677
108
Koenig
1569 to 1676
108
R13
Source
Positions
Size
Add Sequence below?
Winder
*
1678 to 1781
104
Koenig
1677 to 1778
102
R14
Source
Positions
Size
Add Sequence below?
Winder
*
1782 to 1875
94
Koenig
1779 to 1874
96
R15
Source
Positions
Size
Add Sequence below?
Winder
*
1876 to 1973
98
Koenig
1875 to 1973
99
R16
Source
Positions
Size
Add Sequence below?
Winder
*
1994 to 2102
109
Koenig
1992 to 2101
110
R17
Source
Positions
Size
Add Sequence below?
Winder
*
2103 to 2209
107
Koenig
2102 to 2208
107
R18
Source
Positions
Size
Add Sequence below?
Winder
*
2210 to 2319
110
Koenig
2209 to 2318
110
R19
Source
Positions
Size
Add Sequence below?
Winder
*
2327 to 2427
101
Koenig
2319 to 2423
105
H3
Source
Positions
Size
Add Sequence below?
Winder
*
2428 to 2468
41
Koenig
2424 to 2470
47
R20
Source
Positions
Size
Add Sequence below?
Winder
*
2469 to 2578
110
Koenig
2471 to 2577
107
R21
Source
Positions
Size
Add Sequence below?
Winder
*
2579 to 2687
109
Koenig
2578 to 2686
109
R22
Source
Positions
Size
Add Sequence below?
Winder
*
2688 to 2803
116
Koenig
2687 to 2802
116
R23
Source
Positions
Size
Add Sequence below?
Winder
*
2804 to 2932
129
Koenig
2803 to 2931
129
R24
Source
Positions
Size
Add Sequence below?
Winder
*
2933 to 3040
108
Koenig
2932 to 3040
109
H4
Source
Positions
Size
Add Sequence below?
Koenig
*
3041 to 3045
5
WW
Source
Positions
Size
Add Sequence below?
Huang
*
3046 to 3084
39
Ishikawa
3046 to 3084
39
Sudol
3055 to 3092
38
smart00456
3057 to 3088
32
cd00201
3059 to 3088
30
pfam00397
3060 to 3086
27
EFH1
Source
Positions
Size
Add Sequence below?
pfam09068
3087 to 3207
121
Huang
*
3125 to 3207
83
Ishikawa
3125 to 3207
83
EFH2
Source
Positions
Size
Add Sequence below?
Huang
*
3208 to 3290
83
Ishikawa
3208 to 3290
83
pfam09069
3211 to 3302
92
ZZ
Source
Positions
Size
Add Sequence below?
Ishikawa
3307 to 3345
39
pfam00569
3307 to 3352
46
Hnia
*
3307 to 3352
46
smart00291
3308 to 3351
44
cd02334
3311 to 3359
49
Hnia
3313 to 3340
28
C_term
Source
Positions
Size
Add Sequence below?
Koenig
*
3353 to 3685
333
Linkers
Name
Source
Positions
Size
Add Sequence below?
linker Met-CH1
Norwood
*
1 to 8
8
linker CH1-CH2
Norwood
*
122 to 130
9
linker R15-R16
Winder
*
1974 to 1993
20
linker R18-R19
Winder
*
2320 to 2326
7
linker WW-EFH1
Huang
*
3085 to 3124
40
linker EFH2-ZZ
Huang
*
3291 to 3306
16
*
Structural domain use by default in
eDystrophin
You can retrieve sequences by copying it(them) in a text file
Binding domain sequences
Click on arrows in scheme to see a table with all versions of the selected binding domain
You can select a sequence to visualize it in text area below
K19
Source
Positions
Size
Add Sequence below?
Stone
*
1 to 246
246
ABD1
Source
Positions
Size
Add Sequence below?
Norwood
*
9 to 246
238
Banuelos
14 to 243
230
LBD1
Source
Positions
Size
Add Sequence below?
Legardinier
*
338 to 668
331
LBD2
Source
Positions
Size
Add Sequence below?
Legardinier
*
718 to 2423
1706
PAR-1b
Source
Positions
Size
Add Sequence below?
Yamashita
*
1156 to 1368
213
ABD2
Source
Positions
Size
Add Sequence below?
Amann
*
1461 to 2209
749
Synemin
Source
Positions
Size
Add Sequence below?
Bhosle
*
1417 to 1915
499
nNOS
Source
Positions
Size
Add Sequence below?
Lai
*
1994 to 2209
216
Plectin
Source
Positions
Size
Add Sequence below?
Rezniczek
*
3046 to 3352
307
BDG
Source
Positions
Size
Add Sequence below?
Ishikawa
3046 to 3352
307
Huang
*
3046 to 3290
245
Syntrophin
Source
Positions
Size
Add Sequence below?
Newey
*
3501 to 3541
41
Dystrobrevin
Source
Positions
Size
Add Sequence below?
Sadoulet
*
3501 to 3541
41
Synemin2
Source
Positions
Size
Add Sequence below?
Bhosle
*
3051 to 3401
351
Myospryn
Source
Positions
Size
Add Sequence below?
Reynolds
*
3069 to 3685
617
Ankyrin
Source
Positions
Size
Add Sequence below?
Ayalon
*
3069 to 3427
359
*
Binding domain use by default in
eDystrophin
You can retrieve sequences by copy it(them) in a text file
3D-structure models
Choose structure you want to see
Crystallographic structures
Single repeat structure models
Tandem repeat structure models
Select a structure
ABD.pdb: X-Ray diffraction CH1 & CH2
BDG.pdb: X-Ray diffraction WW
R1_3UUN.pdb: X-Ray diffraction
Select a model
R1.pdb: model R1
R2.pdb: model R2
R3.pdb: model R3
R4.pdb: model R4
R5.pdb: model R5
R6.pdb: model R6
R7.pdb: model R7
R8.pdb: model R8
R9.pdb: model R9
R10.pdb: model R10
R11.pdb: model R11
R12.pdb: model R12
R13.pdb: model R13
R14.pdb: model R14
R15.pdb: model R15
R16.pdb: model R16
R17.pdb: model R17
R18.pdb: model R18
R19.pdb: model R19
R20.pdb: model R20
R21.pdb: model R21
R22.pdb: model R22
R23.pdb: model R23
R24.pdb: model R24
Select a model
R1-2.pdb: model R1 & R2
R2-3.pdb: model R2 & R3
R4-5.pdb: model R4 & R5
R5-6.pdb: model R5 & R6
R6-7.pdb: model R6 & R7
R7-8.pdb: model R7 & R8
R8-9.pdb: model R8 & R9
R9-10.pdb: model R9 & R10
R10-11.pdb: model R10 & R11
R11-12.pdb: model R11 & R12
R12-13.pdb: model R12 & R13
R13-14.pdb: model R13 & R14
R14-15.pdb: model R14 & R15
R15-16.pdb: model R15 & R16
R16-17.pdb: model R16 & R17
R17-18.pdb: model R17 & R18
R18-19.pdb: model R18 & R19
R20-21.pdb: model R20 & R21
R21-22.pdb: model R21 & R22
R22-23.pdb: model R22 & R23
R23-24.pdb: model R23 & R24
Chosen model:
Exemple of 3D structure / model
[Legrand et al., 2011]
Structure visualized with
Jmol
. Right Click to display menu. N-terminal is indicated by yellow ball.